IPPRED: server for proteins interactions inference
نویسندگان
چکیده
منابع مشابه
IPPRED: Server for Proteins Interactions Inference
SUMMARY IPPRED is a web based server to infer protein-protein interactions through homology search between candidate proteins and those described as interacting. This simple inference allows to propose or to validate potential interactions. AVAILABILITY IPPRED is freely available at http://cbi.labri.fr/outils/ippred/.
متن کاملCOMPASS server for remote homology inference
COMPASS is a method for homology detection and local alignment construction based on the comparison of multiple sequence alignments (MSAs). The method derives numerical profiles from given MSAs, constructs local profile-profile alignments and analytically estimates E-values for the detected similarities. Until now, COMPASS was only available for download and local installation. Here, we present...
متن کاملIBIS (Inferred Biomolecular Interaction Server) reports, predicts and integrates multiple types of conserved interactions for proteins
We have recently developed the Inferred Biomolecular Interaction Server (IBIS) and database, which reports, predicts and integrates different types of interaction partners and locations of binding sites in proteins based on the analysis of homologous structural complexes. Here, we highlight several new IBIS features and options. The server's webpage is now redesigned to allow users easier acces...
متن کاملTypes and Subtypes for Client-Server Interactions
We define an extension of the π-calculus with a static type system which supports high-level specifications of extended patterns of communication, such as client-server protocols. Subtyping allows protocol specifications to be extended in order to describe richer behaviour; an implemented server can then be replaced by a refined implementation, without invalidating type-correctness of the overa...
متن کاملCompliance for reversible client/server interactions
In the setting of session behaviours, we study an extension of the concept of compliance when a disciplined form of backtracking is present. After adding checkpoints to the syntax of session behaviours, we formalise the operational semantics via a LTS, and define a natural notion of checkpoint compliance. We then obtain a co-inductive characterisation of such compliance relation, and an axiomat...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Bioinformatics
سال: 2003
ISSN: 1367-4803,1460-2059
DOI: 10.1093/bioinformatics/btg091